Ok, I promised I'd rec this, so I'm going to. I stumbled across this fic (well, three fics) on the Archive Of Our Own, which is proving surprisingly fruitful when looking for older fics that have generally disappeared or were on obscure archives.
A common AU for SG1 fans who were also fans of the Tok'ra/Sam Carter story thread is that Jolinar somehow survived. A lot of them are pretty similar variations on the theme. This is the first fic I'd read which is long, involved, and not only goes into a very tasty story that spans months about how Sam deals with what's happened, but also what happens to her team, left behind, and what would have happened in the series had they NOT made contact with the Tok'ra in the way that it happened in canon.
For some reason, the AO3 page lists this as an incomplete series. It isn't. It's definitely complete. Clear a few days and enjoy yourself.
The Compromised Trilogy
A common AU for SG1 fans who were also fans of the Tok'ra/Sam Carter story thread is that Jolinar somehow survived. A lot of them are pretty similar variations on the theme. This is the first fic I'd read which is long, involved, and not only goes into a very tasty story that spans months about how Sam deals with what's happened, but also what happens to her team, left behind, and what would have happened in the series had they NOT made contact with the Tok'ra in the way that it happened in canon.
For some reason, the AO3 page lists this as an incomplete series. It isn't. It's definitely complete. Clear a few days and enjoy yourself.
The Compromised Trilogy